Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_12550 | AMIS_32060 | Hypothetical protein. | Putative TetR-family transcriptional regulator. | 0.504 |
AMIS_12550 | AMIS_41490 | Hypothetical protein. | Hypothetical protein. | 0.652 |
AMIS_12550 | AMIS_41500 | Hypothetical protein. | Hypothetical protein. | 0.678 |
AMIS_22650 | AMIS_32060 | Putative sensor-like histidine kinase. | Putative TetR-family transcriptional regulator. | 0.511 |
AMIS_32050 | AMIS_32060 | Putative pyridoxamine 5'-phosphate oxidase-related protein. | Putative TetR-family transcriptional regulator. | 0.606 |
AMIS_32060 | AMIS_12550 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.504 |
AMIS_32060 | AMIS_22650 | Putative TetR-family transcriptional regulator. | Putative sensor-like histidine kinase. | 0.511 |
AMIS_32060 | AMIS_32050 | Putative TetR-family transcriptional regulator. | Putative pyridoxamine 5'-phosphate oxidase-related protein. | 0.606 |
AMIS_32060 | AMIS_32790 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.646 |
AMIS_32060 | AMIS_41490 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.602 |
AMIS_32060 | AMIS_41500 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.617 |
AMIS_32060 | AMIS_44680 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.604 |
AMIS_32060 | AMIS_51670 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.499 |
AMIS_32060 | AMIS_58920 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.527 |
AMIS_32060 | AMIS_59200 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.573 |
AMIS_32790 | AMIS_32060 | Hypothetical protein. | Putative TetR-family transcriptional regulator. | 0.646 |
AMIS_41490 | AMIS_12550 | Hypothetical protein. | Hypothetical protein. | 0.652 |
AMIS_41490 | AMIS_32060 | Hypothetical protein. | Putative TetR-family transcriptional regulator. | 0.602 |
AMIS_41490 | AMIS_41500 | Hypothetical protein. | Hypothetical protein. | 0.962 |
AMIS_41490 | AMIS_58920 | Hypothetical protein. | Hypothetical protein. | 0.649 |
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