STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_32480Putative ABC transporter permease protein. (319 aa)    
Predicted Functional Partners:
AMIS_32470
Putative ABC transporter permease protein.
 
 
 0.969
AMIS_32490
Putative ABC transporter substrate-binding protein.
 
 
 0.965
AMIS_16950
Putative ABC transporter permease protein.
 
 0.898
AMIS_49170
Putative ABC transporter permease protein.
 
 0.898
AMIS_77290
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.898
AMIS_3980
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.880
AMIS_62480
Putative sugar ABC transporter permease protein.
 
 0.879
AMIS_51120
Putative ABC transporter permease protein.
 
 0.875
AMIS_28100
Putative ABC transporter permease protein.
 
 0.863
AMIS_71260
Putative cellobiose ABC transporter permease protein.
 
 
 0.854
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.