STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_33620Putative two-component system sensor kinase. (409 aa)    
Predicted Functional Partners:
AMIS_33630
Putative two-component system response regulator.
 
 
 0.959
AMIS_67660
Putative two-component system response regulator.
 
 
 0.835
AMIS_29110
Putative two-component system response regulator.
 
 
 0.817
AMIS_49000
Putative two-component system response regulator.
 
 
 0.815
AMIS_26520
Putative two-component system response regulator.
 
 
 0.814
AMIS_34230
Putative two-component system response regulator; CTG start.
 
 
 0.814
AMIS_53210
Putative two-component system response regulator.
 
 
 0.812
AMIS_4290
Putative two-component system response regulator.
 
 
 0.807
AMIS_25720
Putative two-component system response regulator.
 
 
 0.790
AMIS_33650
Putative permease.
 
    0.673
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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