Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_340Hypothetical protein. (492 aa)    
Predicted Functional Partners:
AMIS_5390
Hypothetical protein.
  
     0.770
AMIS_740
Hypothetical protein.
  
     0.770
AMIS_11320
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily.
  
     0.768
AMIS_78740
Hypothetical protein.
  
     0.764
AMIS_55050
Hypothetical protein.
  
     0.763
AMIS_1200
Hypothetical protein.
  
     0.761
AMIS_13980
Hypothetical protein; TPR domain.
  
     0.761
AMIS_77490
Hypothetical protein; TPR domain.
  
   
 0.757
AMIS_74730
Hypothetical protein.
  
     0.754
AMIS_58530
Putative sulfotransferase.
  
     0.753
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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