STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_36490Putative ABC transporter permease protein. (255 aa)    
Predicted Functional Partners:
AMIS_36510
Putative ABC transporter substrate-binding protein.
 
  
 0.967
AMIS_36480
Putative ABC transporter ATP-binding protein.
  
 0.939
AMIS_36500
Putative ABC transporter permease protein.
 
    
0.836
AMIS_44870
Putative ABC transporter ATP-binding protein.
  
 0.827
AMIS_30950
Putative ABC transporter ATP-binding protein.
  
 0.825
AMIS_73420
Putative ABC transporter ATP-binding protein.
  
 0.817
AMIS_54900
Putative ABC transporter ATP-binding protein.
  
 0.795
ssuB
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.788
AMIS_44880
Putative ABC transporter substrate-binding protein.
 
  
 0.702
AMIS_73410
Putative ABC transporter substrate-binding protein.
 
  
 0.618
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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