Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cheA1 | cheA2 | AMIS_76570 | AMIS_68710 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative signal transduction histidine kinase CheA. | 0.924 |
cheA1 | cheB1 | AMIS_76570 | AMIS_76530 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative response regulator receiver modulated methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
cheA1 | cheB3 | AMIS_76570 | AMIS_52450 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative response regulator receiver modulated methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.993 |
cheA1 | cheR1 | AMIS_76570 | AMIS_76520 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative MCP methyltransferase CheR. | 0.953 |
cheA1 | cheR2 | AMIS_76570 | AMIS_68730 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative MCP methyltransferase CheR. | 0.883 |
cheA1 | cheR3 | AMIS_76570 | AMIS_52410 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative MCP methyltransferase CheR with TPR domain. | 0.882 |
cheA1 | cheW1-1 | AMIS_76570 | AMIS_76550 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative chemotaxis signal transduction protein CheW. | 0.995 |
cheA1 | cheW1-2 | AMIS_76570 | AMIS_76560 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative chemotaxis signal transduction protein CheW. | 0.999 |
cheA1 | cheW5 | AMIS_76570 | AMIS_60170 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative chemotaxis signal transduction protein CheW. | 0.989 |
cheA1 | mcp8 | AMIS_76570 | AMIS_37030 | Putative signal transduction histidine kinase CheA without CheW domain. | Putative methyl-accepting chemotaxis protein; MCP. | 0.958 |
cheA2 | cheA1 | AMIS_68710 | AMIS_76570 | Putative signal transduction histidine kinase CheA. | Putative signal transduction histidine kinase CheA without CheW domain. | 0.924 |
cheA2 | cheB1 | AMIS_68710 | AMIS_76530 | Putative signal transduction histidine kinase CheA. | Putative response regulator receiver modulated methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.993 |
cheA2 | cheB3 | AMIS_68710 | AMIS_52450 | Putative signal transduction histidine kinase CheA. | Putative response regulator receiver modulated methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.993 |
cheA2 | cheR1 | AMIS_68710 | AMIS_76520 | Putative signal transduction histidine kinase CheA. | Putative MCP methyltransferase CheR. | 0.881 |
cheA2 | cheR2 | AMIS_68710 | AMIS_68730 | Putative signal transduction histidine kinase CheA. | Putative MCP methyltransferase CheR. | 0.972 |
cheA2 | cheR3 | AMIS_68710 | AMIS_52410 | Putative signal transduction histidine kinase CheA. | Putative MCP methyltransferase CheR with TPR domain. | 0.882 |
cheA2 | cheW1-1 | AMIS_68710 | AMIS_76550 | Putative signal transduction histidine kinase CheA. | Putative chemotaxis signal transduction protein CheW. | 0.986 |
cheA2 | cheW1-2 | AMIS_68710 | AMIS_76560 | Putative signal transduction histidine kinase CheA. | Putative chemotaxis signal transduction protein CheW. | 0.928 |
cheA2 | cheW5 | AMIS_68710 | AMIS_60170 | Putative signal transduction histidine kinase CheA. | Putative chemotaxis signal transduction protein CheW. | 0.986 |
cheA2 | mcp8 | AMIS_68710 | AMIS_37030 | Putative signal transduction histidine kinase CheA. | Putative methyl-accepting chemotaxis protein; MCP. | 0.958 |
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