Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_41460 | AMIS_41470 | Putative GntR-family transcriptional regulator. | Putative MFS transporter. | 0.800 |
AMIS_41460 | AMIS_41480 | Putative GntR-family transcriptional regulator. | Hypothetical protein. | 0.584 |
AMIS_41460 | AMIS_41490 | Putative GntR-family transcriptional regulator. | Hypothetical protein. | 0.574 |
AMIS_41460 | AMIS_41500 | Putative GntR-family transcriptional regulator. | Hypothetical protein. | 0.592 |
AMIS_41470 | AMIS_41460 | Putative MFS transporter. | Putative GntR-family transcriptional regulator. | 0.800 |
AMIS_41470 | AMIS_41480 | Putative MFS transporter. | Hypothetical protein. | 0.584 |
AMIS_41470 | AMIS_41490 | Putative MFS transporter. | Hypothetical protein. | 0.574 |
AMIS_41470 | AMIS_41500 | Putative MFS transporter. | Hypothetical protein. | 0.584 |
AMIS_41470 | AMIS_41520 | Putative MFS transporter. | Hypothetical protein. | 0.427 |
AMIS_41470 | AMIS_66500 | Putative MFS transporter. | Putative glycerophosphoryl diester phosphodiesterase. | 0.661 |
AMIS_41480 | AMIS_41460 | Hypothetical protein. | Putative GntR-family transcriptional regulator. | 0.584 |
AMIS_41480 | AMIS_41470 | Hypothetical protein. | Putative MFS transporter. | 0.584 |
AMIS_41480 | AMIS_41490 | Hypothetical protein. | Hypothetical protein. | 0.865 |
AMIS_41480 | AMIS_41500 | Hypothetical protein. | Hypothetical protein. | 0.854 |
AMIS_41480 | AMIS_41520 | Hypothetical protein. | Hypothetical protein. | 0.532 |
AMIS_41490 | AMIS_41460 | Hypothetical protein. | Putative GntR-family transcriptional regulator. | 0.574 |
AMIS_41490 | AMIS_41470 | Hypothetical protein. | Putative MFS transporter. | 0.574 |
AMIS_41490 | AMIS_41480 | Hypothetical protein. | Hypothetical protein. | 0.865 |
AMIS_41490 | AMIS_41500 | Hypothetical protein. | Hypothetical protein. | 0.962 |
AMIS_41490 | AMIS_41520 | Hypothetical protein. | Hypothetical protein. | 0.557 |
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