STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_4170Putative acylneuraminate cytidylyltransferase. (241 aa)    
Predicted Functional Partners:
AMIS_4160
Hypothetical protein.
 
  
 0.983
AMIS_4200
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.956
AMIS_4210
Putative polysaccharide biosynthesis protein.
 
   
 0.954
AMIS_4190
Hypothetical protein.
 
 
   0.937
AMIS_4430
Putative N-acetylneuraminic acid synthase.
 
  
 0.916
AMIS_4180
Hypothetical protein.
 
     0.883
AMIS_18330
Hypothetical protein.
 
 
   0.725
AMIS_4440
Hypothetical protein.
 
    0.711
AMIS_4270
Hypothetical protein.
 
     0.667
AMIS_18320
Hypothetical protein.
 
     0.618
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.