STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_41860Hypothetical protein; IucA/IucC family. (464 aa)    
Predicted Functional Partners:
AMIS_41870
Hypothetical protein; IucA/IucC family.
 
    
0.933
AMIS_41880
Putative diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.926
sidC
Putative cadaverine N-monooxygenase.
 
  
 0.699
AMIS_32320
Putative NRPS.
  
  
 0.621
AMIS_49210
Hypothetical protein.
  
     0.548
AMIS_15030
Putative subtilisin inhibitor protein; Belongs to the protease inhibitor I16 (SSI) family.
  
     0.533
AMIS_41850
Putative FAD-binding dehydrogenase.
       0.518
AMIS_67720
Hypothetical protein.
  
     0.486
AMIS_26800
Hypothetical protein.
  
     0.484
AMIS_1840
Hypothetical protein.
  
     0.476
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.