STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_42100Putative TetR-family transcriptional regulator. (213 aa)    
Predicted Functional Partners:
AMIS_42090
Putative acyl-CoA dehydrogenase.
 
     0.835
AMIS_42080
Hypothetical protein.
 
     0.727
AMIS_42070
Putative diguanylate cyclase/phosphodiesterase with PAS sensor; EAL, GGDEF, and PAS domains.
       0.664
AMIS_42120
Putative acyl-CoA synthetase.
 
     0.627
AMIS_42110
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.541
AMIS_28600
Putative TetR-family transcriptional regulator.
  
     0.428
AMIS_38000
Putative TetR-family transcriptional regulator.
  
     0.414
egtC
Hypothetical protein; Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine.
  
     0.407
AMIS_78190
Putative acetyl/propionyl-CoA carboxylase beta subunit.
 
   
 0.405
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.