STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_42580Hypothetical protein; Endonuclease/exonuclease/phosphatase family. (267 aa)    
Predicted Functional Partners:
AMIS_44230
Hypothetical protein.
  
     0.762
AMIS_26000
Hypothetical protein.
  
     0.759
AMIS_46360
Hypothetical protein.
  
    0.611
AMIS_42570
Putative M20/M25/M40-family peptidase.
       0.563
def-3
Putative polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
 
     0.563
AMIS_63000
Hypothetical protein.
  
     0.562
AMIS_38830
Putative integral membrane protein.
 
     0.552
AMIS_24900
Hypothetical protein.
  
    0.527
AMIS_42590
Hypothetical protein.
       0.518
AMIS_11950
Hypothetical protein; PHP domain.
  
     0.488
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.