Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_10120 | AMIS_32320 | Hypothetical protein. | Putative NRPS. | 0.420 |
AMIS_10120 | AMIS_42740 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AMIS_13670 | AMIS_32320 | Hypothetical protein. | Putative NRPS. | 0.420 |
AMIS_13670 | AMIS_42740 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AMIS_13670 | AMIS_46380 | Hypothetical protein. | Hypothetical protein. | 0.555 |
AMIS_13670 | AMIS_78740 | Hypothetical protein. | Hypothetical protein. | 0.748 |
AMIS_32320 | AMIS_10120 | Putative NRPS. | Hypothetical protein. | 0.420 |
AMIS_32320 | AMIS_13670 | Putative NRPS. | Hypothetical protein. | 0.420 |
AMIS_32320 | AMIS_42740 | Putative NRPS. | Hypothetical protein. | 0.633 |
AMIS_32320 | AMIS_46380 | Putative NRPS. | Hypothetical protein. | 0.420 |
AMIS_32320 | AMIS_49650 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32320 | AMIS_49720 | Putative NRPS. | Hypothetical protein; Condensation domain of NRPS. | 0.999 |
AMIS_32320 | AMIS_5970 | Putative NRPS. | Hypothetical protein. | 0.420 |
AMIS_32320 | AMIS_78740 | Putative NRPS. | Hypothetical protein. | 0.479 |
AMIS_32320 | AMIS_8140 | Putative NRPS. | Hypothetical protein. | 0.420 |
AMIS_40570 | AMIS_42740 | Hypothetical protein. | Hypothetical protein. | 0.495 |
AMIS_42740 | AMIS_10120 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AMIS_42740 | AMIS_13670 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AMIS_42740 | AMIS_32320 | Hypothetical protein. | Putative NRPS. | 0.633 |
AMIS_42740 | AMIS_40570 | Hypothetical protein. | Hypothetical protein. | 0.495 |
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