Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_11060 | AMIS_42790 | Putative protein dithiol-disulfide isomerase. | Hypothetical protein. | 0.516 |
AMIS_11060 | AMIS_9830 | Putative protein dithiol-disulfide isomerase. | Putative NADPH-dependent FMN reductase. | 0.494 |
AMIS_32120 | AMIS_42790 | Putative protein dithiol-disulfide isomerase. | Hypothetical protein. | 0.516 |
AMIS_32120 | AMIS_9830 | Putative protein dithiol-disulfide isomerase. | Putative NADPH-dependent FMN reductase. | 0.494 |
AMIS_32320 | AMIS_32330 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32320 | AMIS_42790 | Putative NRPS. | Hypothetical protein. | 0.702 |
AMIS_32320 | AMIS_49650 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32320 | AMIS_49720 | Putative NRPS. | Hypothetical protein; Condensation domain of NRPS. | 0.999 |
AMIS_32320 | AMIS_58770 | Putative NRPS. | Putative NRPS-type-I PKS fusion protein. | 0.999 |
AMIS_32330 | AMIS_32320 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32330 | AMIS_42790 | Putative NRPS. | Hypothetical protein. | 0.580 |
AMIS_32330 | AMIS_49650 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32330 | AMIS_49720 | Putative NRPS. | Hypothetical protein; Condensation domain of NRPS. | 0.999 |
AMIS_32330 | AMIS_58770 | Putative NRPS. | Putative NRPS-type-I PKS fusion protein. | 0.999 |
AMIS_42780 | AMIS_42790 | Hypothetical protein. | Hypothetical protein. | 0.476 |
AMIS_42790 | AMIS_11060 | Hypothetical protein. | Putative protein dithiol-disulfide isomerase. | 0.516 |
AMIS_42790 | AMIS_32120 | Hypothetical protein. | Putative protein dithiol-disulfide isomerase. | 0.516 |
AMIS_42790 | AMIS_32320 | Hypothetical protein. | Putative NRPS. | 0.702 |
AMIS_42790 | AMIS_32330 | Hypothetical protein. | Putative NRPS. | 0.580 |
AMIS_42790 | AMIS_42780 | Hypothetical protein. | Hypothetical protein. | 0.476 |
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