STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_45550Putative transposase. (589 aa)    
Predicted Functional Partners:
AMIS_72120
Putative RNA ligase.
  
     0.716
AMIS_26940
Hypothetical protein.
  
     0.601
AMIS_45560
Putative ArsR-family transcriptional regulator.
 
     0.479
AMIS_4100
Hypothetical protein.
 
     0.464
AMIS_58130
Putative O-antigen polymerase.
  
     0.457
AMIS_25350
Hypothetical protein.
  
    0.446
AMIS_58560
Putative AfsR-family transcriptional regulator.
  
     0.443
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.