Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_18730 | AMIS_22740 | Putative serine/threonine protein kinase. | Hypothetical protein; EAL domain. | 0.995 |
AMIS_18730 | AMIS_30890 | Putative serine/threonine protein kinase. | Putative multi-sensor signal transduction histidine kinase. | 0.995 |
AMIS_18730 | AMIS_30990 | Putative serine/threonine protein kinase. | Putative multi-sensor signal transduction histidine kinase. | 0.996 |
AMIS_18730 | AMIS_36070 | Putative serine/threonine protein kinase. | Putative two-component system sensor kinase. | 0.996 |
AMIS_18730 | AMIS_46070 | Putative serine/threonine protein kinase. | Hypothetical protein; GGDEF domain. | 0.832 |
AMIS_18730 | AMIS_5830 | Putative serine/threonine protein kinase. | Putative cGMP-specific phosphodiesterase; GAF, GGDEF, and EAL domains. | 0.943 |
AMIS_18730 | AMIS_60690 | Putative serine/threonine protein kinase. | Putative diguanylate cyclase/phosphodiesterase; EAL and GGDEF domains. | 0.947 |
AMIS_18730 | AMIS_67840 | Putative serine/threonine protein kinase. | Hypothetical protein; GAF domain. | 0.994 |
AMIS_18730 | AMIS_79280 | Putative serine/threonine protein kinase. | Hypothetical protein; EAL domain. | 0.995 |
AMIS_18730 | AMIS_9260 | Putative serine/threonine protein kinase. | Putative diguanylate cyclase/phosphodiesterase with PAS sensor; EAL, GGDEF, and PAS domains. | 0.995 |
AMIS_22740 | AMIS_18730 | Hypothetical protein; EAL domain. | Putative serine/threonine protein kinase. | 0.995 |
AMIS_22740 | AMIS_30890 | Hypothetical protein; EAL domain. | Putative multi-sensor signal transduction histidine kinase. | 0.990 |
AMIS_22740 | AMIS_30990 | Hypothetical protein; EAL domain. | Putative multi-sensor signal transduction histidine kinase. | 0.993 |
AMIS_22740 | AMIS_36070 | Hypothetical protein; EAL domain. | Putative two-component system sensor kinase. | 0.996 |
AMIS_22740 | AMIS_46070 | Hypothetical protein; EAL domain. | Hypothetical protein; GGDEF domain. | 0.908 |
AMIS_22740 | AMIS_5830 | Hypothetical protein; EAL domain. | Putative cGMP-specific phosphodiesterase; GAF, GGDEF, and EAL domains. | 0.929 |
AMIS_22740 | AMIS_60690 | Hypothetical protein; EAL domain. | Putative diguanylate cyclase/phosphodiesterase; EAL and GGDEF domains. | 0.971 |
AMIS_22740 | AMIS_67840 | Hypothetical protein; EAL domain. | Hypothetical protein; GAF domain. | 0.995 |
AMIS_22740 | AMIS_79280 | Hypothetical protein; EAL domain. | Hypothetical protein; EAL domain. | 0.920 |
AMIS_22740 | AMIS_9260 | Hypothetical protein; EAL domain. | Putative diguanylate cyclase/phosphodiesterase with PAS sensor; EAL, GGDEF, and PAS domains. | 0.900 |
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