STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_46280Putative alcohol dehydrogenase. (340 aa)    
Predicted Functional Partners:
AMIS_28610
Putative alkane-1-monooxygenase.
  
  
  0.912
AMIS_21720
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
  0.908
AMIS_24130
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.908
AMIS_74700
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
  0.908
AMIS_8620
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.908
AMIS_27410
Putative haloalkane dehalogenase.
   
  0.906
AMIS_26990
Putative amine oxidoreductase.
    
 0.901
AMIS_49650
Putative NRPS.
  
 
 0.804
AMIS_46290
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily.
       0.773
AMIS_46270
Putative pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.751
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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