STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_48890Putative TetR-family transcriptional regulator. (185 aa)    
Predicted Functional Partners:
AMIS_48880
Putative SMR-type multi-drug efflux transporter.
  
  
 0.881
AMIS_61620
Putative HxlR-family transcriptional regulator.
   
    0.799
AMIS_70220
Putative signal peptidase I; Belongs to the peptidase S26 family.
   
    0.769
AMIS_80360
Putative cell envelope-related transcriptional attenuator.
   
    0.727
AMIS_65610
Putative AdpA-family transcriptional regulator.
  
    0.611
AMIS_73560
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.583
cobB-2
Hypothetical protein; Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.578
AMIS_64380
Putative Sir2-family regulator protein.
   
    0.578
AMIS_16250
Putative ArsR-family transcriptional regulator.
  
    0.569
AMIS_65140
Putative AfsR-family transcriptional regulator.
   
    0.566
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.