STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_50490Putative oxidoreductase. (381 aa)    
Predicted Functional Partners:
AMIS_49650
Putative NRPS.
  
 
 0.779
AMIS_60620
Putative fatty acid oxidation complex alpha subunit.
  
 0.725
AMIS_68350
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.725
AMIS_49720
Hypothetical protein; Condensation domain of NRPS.
  
 
 0.677
AMIS_32320
Putative NRPS.
  
 
 0.660
AMIS_58770
Putative NRPS-type-I PKS fusion protein.
  
 
 0.613
AMIS_32330
Putative NRPS.
  
 
 0.610
AMIS_71430
Putative electron transfer flavoprotein alpha subunit.
  
 
 0.604
AMIS_71440
Putative electron transfer flavoprotein beta subunit.
  
 
 0.598
AMIS_19260
Putative enoyl-CoA hydratase/isomerase.
 
 0.576
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.