Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_27570 | AMIS_32320 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative NRPS. | 0.580 |
AMIS_27570 | AMIS_49650 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative NRPS. | 0.745 |
AMIS_27570 | AMIS_49720 | Putative D-alanyl-D-alanine carboxypeptidase. | Hypothetical protein; Condensation domain of NRPS. | 0.626 |
AMIS_27570 | AMIS_50570 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative carboxylesterase. | 0.472 |
AMIS_31990 | AMIS_32320 | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | Putative NRPS. | 0.580 |
AMIS_31990 | AMIS_49650 | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | Putative NRPS. | 0.742 |
AMIS_31990 | AMIS_49720 | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | Hypothetical protein; Condensation domain of NRPS. | 0.620 |
AMIS_31990 | AMIS_50570 | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | Putative carboxylesterase. | 0.469 |
AMIS_32320 | AMIS_27570 | Putative NRPS. | Putative D-alanyl-D-alanine carboxypeptidase. | 0.580 |
AMIS_32320 | AMIS_31990 | Putative NRPS. | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | 0.580 |
AMIS_32320 | AMIS_49650 | Putative NRPS. | Putative NRPS. | 0.999 |
AMIS_32320 | AMIS_49720 | Putative NRPS. | Hypothetical protein; Condensation domain of NRPS. | 0.999 |
AMIS_32320 | AMIS_50560 | Putative NRPS. | Hypothetical protein. | 0.914 |
AMIS_32320 | AMIS_50570 | Putative NRPS. | Putative carboxylesterase. | 0.580 |
AMIS_32320 | AMIS_50580 | Putative NRPS. | Putative NDP-deoxyglucose-2,3-dehydratase. | 0.993 |
AMIS_32320 | AMIS_50590 | Putative NRPS. | Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.584 |
AMIS_32320 | AMIS_50600 | Putative NRPS. | Putative methyltransferase. | 0.468 |
AMIS_32320 | AMIS_50620 | Putative NRPS. | Putative NAD-dependent epimerase/dehydratase. | 0.458 |
AMIS_49650 | AMIS_27570 | Putative NRPS. | Putative D-alanyl-D-alanine carboxypeptidase. | 0.745 |
AMIS_49650 | AMIS_31990 | Putative NRPS. | Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the class-A beta-lactamase family. | 0.742 |
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