Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_50750 | AMIS_50760 | Putative TetR-family transcriptional regulator. | Putative MFS transporter; Belongs to the major facilitator superfamily. | 0.788 |
AMIS_50750 | AMIS_50770 | Putative TetR-family transcriptional regulator. | Hypothetical protein. | 0.559 |
AMIS_50750 | AMIS_50780 | Putative TetR-family transcriptional regulator. | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.513 |
AMIS_50760 | AMIS_50750 | Putative MFS transporter; Belongs to the major facilitator superfamily. | Putative TetR-family transcriptional regulator. | 0.788 |
AMIS_50760 | AMIS_50770 | Putative MFS transporter; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.559 |
AMIS_50760 | AMIS_50780 | Putative MFS transporter; Belongs to the major facilitator superfamily. | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.528 |
AMIS_50770 | AMIS_50750 | Hypothetical protein. | Putative TetR-family transcriptional regulator. | 0.559 |
AMIS_50770 | AMIS_50760 | Hypothetical protein. | Putative MFS transporter; Belongs to the major facilitator superfamily. | 0.559 |
AMIS_50770 | AMIS_50780 | Hypothetical protein. | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.721 |
AMIS_50770 | AMIS_50790 | Hypothetical protein. | Putative transposase. | 0.513 |
AMIS_50780 | AMIS_50750 | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative TetR-family transcriptional regulator. | 0.513 |
AMIS_50780 | AMIS_50760 | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative MFS transporter; Belongs to the major facilitator superfamily. | 0.528 |
AMIS_50780 | AMIS_50770 | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Hypothetical protein. | 0.721 |
AMIS_50780 | AMIS_50790 | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | Putative transposase. | 0.561 |
AMIS_50790 | AMIS_50770 | Putative transposase. | Hypothetical protein. | 0.513 |
AMIS_50790 | AMIS_50780 | Putative transposase. | Putative PfkB-family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.561 |