STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_55270Putative two-component system sensor kinase. (396 aa)    
Predicted Functional Partners:
AMIS_55260
Putative two-component system response regulator.
 
   0.885
AMIS_55280
Hypothetical protein.
       0.780
AMIS_79610
Putative two-component system sensor kinase.
  
     0.676
AMIS_55290
Hypothetical protein.
 
     0.662
AMIS_49310
Putative two-component system response regulator.
 
   0.643
AMIS_46400
Putative two-component system sensor kinase.
  
     0.617
AMIS_41290
Putative two-component system sensor kinase.
  
     0.614
AMIS_53850
Putative two-component system response regulator.
 
   0.577
AMIS_55240
Putative ABC transporter permease protein.
       0.556
metN
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.556
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.