STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_55510Putative endo-1,4-beta-galactanase; Glycosyl hydrolase family 53. (365 aa)    
Predicted Functional Partners:
AMIS_55520
Putative endo-1,4-beta-galactanase; Glycosyl hydrolase family 53.
 
    
0.778
AMIS_27990
Glycosyl hydrolase family 43.
 
   
 0.687
AMIS_55480
Putative ABC transporter permease protein.
 
    0.687
AMIS_57730
Glycosyl hydrolase family 43.
 
   
 0.666
AMIS_10370
Putative pectinesterase; Ricin-type beta-trefoil lectin domain.
  
   
 0.652
AMIS_33480
Glycosyl hydrolase family 11, Cellulose binding domain; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.650
AMIS_55490
Putative ABC transporter permease protein.
 
     0.645
AMIS_55470
Putative ABC transporter substrate-binding protein.
 
     0.640
AMIS_66820
Glycosyl hydrolase family 10, Cellulose binding domain.
  
     0.630
AMIS_18940
Putative pectinesterase.
  
   
 0.615
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.