Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_15710 | AMIS_55760 | Putative glutamate synthase large subunit. | Hypothetical protein. | 0.523 |
AMIS_29550 | AMIS_55760 | Putative transposase. | Hypothetical protein. | 0.462 |
AMIS_29550 | AMIS_63070 | Putative transposase. | Hypothetical protein. | 0.584 |
AMIS_29550 | AMIS_77280 | Putative transposase. | Hypothetical protein. | 0.468 |
AMIS_45880 | AMIS_55760 | Putative transposase. | Hypothetical protein. | 0.462 |
AMIS_45880 | AMIS_63070 | Putative transposase. | Hypothetical protein. | 0.584 |
AMIS_45880 | AMIS_77280 | Putative transposase. | Hypothetical protein. | 0.468 |
AMIS_55730 | AMIS_55740 | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Hypothetical protein. | 0.788 |
AMIS_55730 | AMIS_55750 | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Hypothetical protein. | 0.571 |
AMIS_55730 | AMIS_55760 | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Hypothetical protein. | 0.487 |
AMIS_55740 | AMIS_55730 | Hypothetical protein. | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.788 |
AMIS_55740 | AMIS_55750 | Hypothetical protein. | Hypothetical protein. | 0.565 |
AMIS_55740 | AMIS_55760 | Hypothetical protein. | Hypothetical protein. | 0.487 |
AMIS_55750 | AMIS_55730 | Hypothetical protein. | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.571 |
AMIS_55750 | AMIS_55740 | Hypothetical protein. | Hypothetical protein. | 0.565 |
AMIS_55750 | AMIS_55760 | Hypothetical protein. | Hypothetical protein. | 0.658 |
AMIS_55760 | AMIS_15710 | Hypothetical protein. | Putative glutamate synthase large subunit. | 0.523 |
AMIS_55760 | AMIS_29550 | Hypothetical protein. | Putative transposase. | 0.462 |
AMIS_55760 | AMIS_45880 | Hypothetical protein. | Putative transposase. | 0.462 |
AMIS_55760 | AMIS_55730 | Hypothetical protein. | Putative phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.487 |
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