STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_56320Putative short-chain dehydrogenase. (268 aa)    
Predicted Functional Partners:
AMIS_49720
Hypothetical protein; Condensation domain of NRPS.
  
 
 0.791
AMIS_56300
Putative acyl-CoA dehydrogenase.
  
  0.785
AMIS_49650
Putative NRPS.
  
 
 0.783
AMIS_56310
Putative acyl-CoA synthetase.
  
 
 0.778
AMIS_32320
Putative NRPS.
  
 
 0.756
AMIS_42390
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.741
AMIS_58770
Putative NRPS-type-I PKS fusion protein.
  
 
 0.670
AMIS_32330
Putative NRPS.
  
 
 0.644
AMIS_57300
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.642
AMIS_56290
Hypothetical protein; MaoC-like domain.
  
  0.637
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.