STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_58130Putative O-antigen polymerase. (408 aa)    
Predicted Functional Partners:
AMIS_74990
Putative glycosyltransferase.
  
  
 0.887
AMIS_80220
Putative undecaprenyl-phosphate glycosyl-1-phosphate transferase.
  
  
 0.887
AMIS_58070
Hypothetical protein.
 
     0.865
AMIS_58150
Hypothetical protein.
 
     0.857
AMIS_58120
Hypothetical protein.
  
  
 0.856
AMIS_58080
Putative polysaccharide deacetylase.
 
   
 0.849
AMIS_58110
Hypothetical protein; CobQ/CobB/MinD/ParA nucleotide binding domain.
  
  
 0.831
AMIS_58100
Putative glycosyltransferase.
 
  
 0.827
AMIS_58140
Hypothetical protein.
       0.788
AMIS_73620
Hypothetical protein.
 
     0.779
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.