STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_59930Putative IclR-family transcriptional regulator. (258 aa)    
Predicted Functional Partners:
AMIS_59910
Putative NAD-dependent epimerase/dehydratase.
 
    0.811
AMIS_59920
Putative aldehyde dehydrogenase.
       0.773
AMIS_24770
Putative IclR-family transcriptional regulator.
  
     0.769
AMIS_35010
Putative IclR-family transcriptional regulator.
  
     0.763
AMIS_70970
Putative IclR-family transcriptional regulator.
  
     0.753
AMIS_59860
Putative glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.660
AMIS_59900
Putative ABC transporter substrate-binding protein.
 
    0.643
AMIS_59870
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
    0.613
AMIS_59850
Hypothetical protein.
 
     0.599
AMIS_59890
Putative ABC transporter permease protein.
       0.524
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.