STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_60150Glycosyl hydrolase family 46, F5/8 type C domain. (391 aa)    
Predicted Functional Partners:
AMIS_73130
Glycosyl hydrolase family 46, F5/8 type C domain.
  
  
 
0.910
AMIS_14680
Glycosyl hydrolase family 18, Carbohydrate binding domain; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.565
AMIS_60140
Hypothetical protein.
       0.541
AMIS_4550
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.512
AMIS_51210
Putative cellulose/chitin-binding protein; Cellulose binding domain, Chitin binding domain.
 
  
 0.460
AMIS_65930
Putative membrane protein.
 
     0.453
AMIS_55220
Putative secreted chitin-binding protein; Chitin binding domain, Carbohydrate binding domain.
 
  
 0.445
AMIS_72530
Glycosyl hydrolase family 18, Carbohydrate binding domain.
 
     0.423
AMIS_52570
Putative secreted chitin-binding protein; Chitin binding domain, Carbohydrate binding domain.
 
  
 0.421
AMIS_38790
Glycosyl hydrolase family 16, F5/8 type C domain.
     0.413
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.