STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_61170Putative DeoR-family transcriptional regulator. (253 aa)    
Predicted Functional Partners:
AMIS_61160
Putative 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.973
AMIS_61130
Putative phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA; PTS.
 
     0.802
AMIS_61100
Putative phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
  
 0.776
AMIS_61140
Putative phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB; PTS.
 
     0.765
AMIS_61150
Putative phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC; PTS.
 
     0.735
AMIS_61110
Putative phosphocarrier protein HPr; PTS.
 
  
 0.647
AMIS_61120
Putative alcohol dehydrogenase.
 
     0.624
AMIS_17620
Putative PfkB-family carbohydrate kinase.
 
  
 0.619
AMIS_12960
Putative PfkB-family carbohydrate kinase.
  
  
 0.564
AMIS_68830
Putative acyl-CoA synthetase.
    
   0.512
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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