Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_33250 | AMIS_35280 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.780 |
AMIS_33250 | AMIS_64010 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.794 |
AMIS_33250 | AMIS_66710 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.769 |
AMIS_35280 | AMIS_33250 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.780 |
AMIS_35280 | AMIS_35290 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.952 |
AMIS_35280 | AMIS_42190 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.780 |
AMIS_35280 | AMIS_45530 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.778 |
AMIS_35280 | AMIS_60330 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.780 |
AMIS_35280 | AMIS_63990 | Hypothetical protein; DGPF domain. | Hypothetical protein. | 0.780 |
AMIS_35280 | AMIS_64010 | Hypothetical protein; DGPF domain. | Hypothetical protein; DGPF domain. | 0.773 |
AMIS_35280 | AMIS_66710 | Hypothetical protein; DGPF domain. | Hypothetical protein; DGPF domain. | 0.769 |
AMIS_35280 | AMIS_66720 | Hypothetical protein; DGPF domain. | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | 0.780 |
AMIS_35290 | AMIS_35280 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.952 |
AMIS_35290 | AMIS_63990 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.774 |
AMIS_35290 | AMIS_64010 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.778 |
AMIS_35290 | AMIS_66710 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.768 |
AMIS_42190 | AMIS_35280 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.780 |
AMIS_42190 | AMIS_63990 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.774 |
AMIS_42190 | AMIS_64010 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.779 |
AMIS_42190 | AMIS_66710 | Putative RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein; DGPF domain. | 0.766 |
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