STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_64210Hypothetical protein. (116 aa)    
Predicted Functional Partners:
AMIS_33000
Hypothetical protein.
  
     0.646
AMIS_64220
Hypothetical protein.
 
     0.640
AMIS_11700
Hypothetical protein.
  
     0.619
AMIS_13040
Hypothetical protein.
  
     0.577
AMIS_75950
Hypothetical protein.
  
     0.569
rpoZ
Putative RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   
 0.542
AMIS_75180
Hypothetical protein.
  
     0.535
AMIS_13200
Hypothetical protein.
  
     0.516
AMIS_1900
Putative cytochrome c biogenesis membrane protein.
  
     0.515
AMIS_32750
Hypothetical protein; FG-GAP repeat.
  
     0.512
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.