STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_64610Putative ATPase. (353 aa)    
Predicted Functional Partners:
AMIS_64630
Putative VWA domain; CoxE-like protein.
 
  
 0.955
AMIS_64620
Hypothetical protein.
 
  
 0.953
AMIS_64600
Hypothetical protein.
 
     0.898
AMIS_61700
Putative VWA domain; CoxE-like protein.
 
  
 0.788
AMIS_61710
Hypothetical protein.
 
  
 0.775
AMIS_66850
Hypothetical protein.
 
  
 0.762
AMIS_64640
Putative methyltransferase.
       0.737
AMIS_59230
Hypothetical protein.
  
     0.424
AMIS_64590
Hypothetical protein.
       0.418
kptA
Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
  
     0.416
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.