STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_65460Hypothetical protein. (201 aa)    
Predicted Functional Partners:
AMIS_65450
Hypothetical protein.
 
     0.833
AMIS_65440
Hypothetical protein.
       0.667
AMIS_65390
Hypothetical protein.
 
     0.547
AMIS_65420
Putative ribonuclease BN.
     
 0.493
AMIS_65430
Hypothetical protein; Diacylglycerol kinase catalytic domain.
       0.482
AMIS_65410
Putative phosphatase.
       0.467
AMIS_65400
Putative endonuclease/exonuclease/phosphatase-family protein.
       0.458
AMIS_17920
Putative phosphodiesterase/nucleotide pyrophosphatase.
     0.420
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.