Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_15950 | AMIS_67290 | AMIS_15950 | AMIS_67290 | Putative ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Putative trypsin-like serine protease. | 0.560 |
AMIS_15950 | clpP-2 | AMIS_15950 | AMIS_11240 | Putative ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Putative ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.966 |
AMIS_67270 | AMIS_67280 | AMIS_67270 | AMIS_67280 | Hypothetical protein; Thioesterase superfamily. | Hypothetical protein. | 0.718 |
AMIS_67270 | AMIS_67290 | AMIS_67270 | AMIS_67290 | Hypothetical protein; Thioesterase superfamily. | Putative trypsin-like serine protease. | 0.652 |
AMIS_67270 | AMIS_67310 | AMIS_67270 | AMIS_67310 | Hypothetical protein; Thioesterase superfamily. | Putative glycosyltransferase. | 0.467 |
AMIS_67280 | AMIS_67270 | AMIS_67280 | AMIS_67270 | Hypothetical protein. | Hypothetical protein; Thioesterase superfamily. | 0.718 |
AMIS_67280 | AMIS_67290 | AMIS_67280 | AMIS_67290 | Hypothetical protein. | Putative trypsin-like serine protease. | 0.693 |
AMIS_67280 | AMIS_67310 | AMIS_67280 | AMIS_67310 | Hypothetical protein. | Putative glycosyltransferase. | 0.499 |
AMIS_67290 | AMIS_15950 | AMIS_67290 | AMIS_15950 | Putative trypsin-like serine protease. | Putative ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.560 |
AMIS_67290 | AMIS_67270 | AMIS_67290 | AMIS_67270 | Putative trypsin-like serine protease. | Hypothetical protein; Thioesterase superfamily. | 0.652 |
AMIS_67290 | AMIS_67280 | AMIS_67290 | AMIS_67280 | Putative trypsin-like serine protease. | Hypothetical protein. | 0.693 |
AMIS_67290 | AMIS_67310 | AMIS_67290 | AMIS_67310 | Putative trypsin-like serine protease. | Putative glycosyltransferase. | 0.565 |
AMIS_67290 | AMIS_70580 | AMIS_67290 | AMIS_70580 | Putative trypsin-like serine protease. | Putative haloacid dehalogenase-like hydrolase. | 0.724 |
AMIS_67290 | arc | AMIS_67290 | AMIS_53630 | Putative trypsin-like serine protease. | Putative AAA ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.705 |
AMIS_67290 | clpP | AMIS_67290 | AMIS_11230 | Putative trypsin-like serine protease. | Putative ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.607 |
AMIS_67290 | clpP-2 | AMIS_67290 | AMIS_11240 | Putative trypsin-like serine protease. | Putative ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.666 |
AMIS_67290 | clpP-3 | AMIS_67290 | AMIS_72590 | Putative trypsin-like serine protease. | Putative ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.602 |
AMIS_67290 | pnp | AMIS_67290 | AMIS_69540 | Putative trypsin-like serine protease. | Putative guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase alpha chain; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.589 |
AMIS_67310 | AMIS_67270 | AMIS_67310 | AMIS_67270 | Putative glycosyltransferase. | Hypothetical protein; Thioesterase superfamily. | 0.467 |
AMIS_67310 | AMIS_67280 | AMIS_67310 | AMIS_67280 | Putative glycosyltransferase. | Hypothetical protein. | 0.499 |
page 1 of 2