Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_53010 | AMIS_53020 | Hypothetical protein; FMN-binding domain. | Putative oxidoreductase. | 0.953 |
AMIS_53010 | AMIS_55420 | Hypothetical protein; FMN-binding domain. | Putative oxidoreductase. | 0.801 |
AMIS_53010 | AMIS_67370 | Hypothetical protein; FMN-binding domain. | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.855 |
AMIS_53010 | AMIS_67380 | Hypothetical protein; FMN-binding domain. | Hypothetical protein; FMN-binding domain. | 0.459 |
AMIS_53010 | AMIS_67390 | Hypothetical protein; FMN-binding domain. | Putative oxidoreductase. | 0.803 |
AMIS_53020 | AMIS_53010 | Putative oxidoreductase. | Hypothetical protein; FMN-binding domain. | 0.953 |
AMIS_53020 | AMIS_67370 | Putative oxidoreductase. | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.791 |
AMIS_53020 | AMIS_67380 | Putative oxidoreductase. | Hypothetical protein; FMN-binding domain. | 0.832 |
AMIS_54700 | AMIS_67370 | Hypothetical protein. | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.428 |
AMIS_55420 | AMIS_53010 | Putative oxidoreductase. | Hypothetical protein; FMN-binding domain. | 0.801 |
AMIS_55420 | AMIS_67370 | Putative oxidoreductase. | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.755 |
AMIS_55420 | AMIS_67380 | Putative oxidoreductase. | Hypothetical protein; FMN-binding domain. | 0.802 |
AMIS_67370 | AMIS_53010 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein; FMN-binding domain. | 0.855 |
AMIS_67370 | AMIS_53020 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative oxidoreductase. | 0.791 |
AMIS_67370 | AMIS_54700 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.428 |
AMIS_67370 | AMIS_55420 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative oxidoreductase. | 0.755 |
AMIS_67370 | AMIS_67380 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein; FMN-binding domain. | 0.950 |
AMIS_67370 | AMIS_67390 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative oxidoreductase. | 0.937 |
AMIS_67370 | AMIS_67400 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative methyltransferase. | 0.446 |
AMIS_67370 | AMIS_67410 | Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative methyltransferase; Belongs to the precorrin methyltransferase family. | 0.431 |
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