Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_14150 | AMIS_74030 | AMIS_14150 | AMIS_74030 | Putative cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein. | 0.452 |
AMIS_26470 | AMIS_74030 | AMIS_26470 | AMIS_74030 | Hypothetical protein; RHS repeat. | Hypothetical protein. | 0.476 |
AMIS_44240 | AMIS_74030 | AMIS_44240 | AMIS_74030 | Hypothetical protein; RHS repeat. | Hypothetical protein. | 0.482 |
AMIS_4820 | AMIS_74030 | AMIS_4820 | AMIS_74030 | Hypothetical protein. | Hypothetical protein. | 0.512 |
AMIS_74010 | AMIS_74020 | AMIS_74010 | AMIS_74020 | Putative S51-family peptidase; Belongs to the peptidase S51 family. | Hypothetical protein. | 0.619 |
AMIS_74010 | AMIS_74030 | AMIS_74010 | AMIS_74030 | Putative S51-family peptidase; Belongs to the peptidase S51 family. | Hypothetical protein. | 0.501 |
AMIS_74020 | AMIS_74010 | AMIS_74020 | AMIS_74010 | Hypothetical protein. | Putative S51-family peptidase; Belongs to the peptidase S51 family. | 0.619 |
AMIS_74020 | AMIS_74030 | AMIS_74020 | AMIS_74030 | Hypothetical protein. | Hypothetical protein. | 0.648 |
AMIS_74020 | AMIS_74040 | AMIS_74020 | AMIS_74040 | Hypothetical protein. | Putative MarR-family transcriptional regulator. | 0.408 |
AMIS_74030 | AMIS_14150 | AMIS_74030 | AMIS_14150 | Hypothetical protein. | Putative cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.452 |
AMIS_74030 | AMIS_26470 | AMIS_74030 | AMIS_26470 | Hypothetical protein. | Hypothetical protein; RHS repeat. | 0.476 |
AMIS_74030 | AMIS_44240 | AMIS_74030 | AMIS_44240 | Hypothetical protein. | Hypothetical protein; RHS repeat. | 0.482 |
AMIS_74030 | AMIS_4820 | AMIS_74030 | AMIS_4820 | Hypothetical protein. | Hypothetical protein. | 0.512 |
AMIS_74030 | AMIS_74010 | AMIS_74030 | AMIS_74010 | Hypothetical protein. | Putative S51-family peptidase; Belongs to the peptidase S51 family. | 0.501 |
AMIS_74030 | AMIS_74020 | AMIS_74030 | AMIS_74020 | Hypothetical protein. | Hypothetical protein. | 0.648 |
AMIS_74030 | AMIS_74040 | AMIS_74030 | AMIS_74040 | Hypothetical protein. | Putative MarR-family transcriptional regulator. | 0.458 |
AMIS_74030 | AMIS_75120 | AMIS_74030 | AMIS_75120 | Hypothetical protein. | Putative deoxyribonuclease. | 0.549 |
AMIS_74030 | ispE | AMIS_74030 | AMIS_75080 | Hypothetical protein. | Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.517 |
AMIS_74030 | rsmA | AMIS_74030 | AMIS_75100 | Hypothetical protein. | Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.885 |
AMIS_74040 | AMIS_74020 | AMIS_74040 | AMIS_74020 | Putative MarR-family transcriptional regulator. | Hypothetical protein. | 0.408 |
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