Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_11030 | AMIS_6900 | Hypothetical protein. | Hypothetical protein. | 0.495 |
AMIS_11030 | AMIS_69230 | Hypothetical protein. | Hypothetical protein; PspA/IM30 family. | 0.790 |
AMIS_11030 | AMIS_73010 | Hypothetical protein. | Putative anti-sigma factor. | 0.549 |
AMIS_11030 | AMIS_74410 | Hypothetical protein. | Putative membrane protein. | 0.531 |
AMIS_16620 | AMIS_74410 | Hypothetical protein; Membrane flanked domain. | Putative membrane protein. | 0.562 |
AMIS_6900 | AMIS_11030 | Hypothetical protein. | Hypothetical protein. | 0.495 |
AMIS_6900 | AMIS_69230 | Hypothetical protein. | Hypothetical protein; PspA/IM30 family. | 0.724 |
AMIS_6900 | AMIS_74410 | Hypothetical protein. | Putative membrane protein. | 0.445 |
AMIS_69230 | AMIS_11030 | Hypothetical protein; PspA/IM30 family. | Hypothetical protein. | 0.790 |
AMIS_69230 | AMIS_6900 | Hypothetical protein; PspA/IM30 family. | Hypothetical protein. | 0.724 |
AMIS_69230 | AMIS_73010 | Hypothetical protein; PspA/IM30 family. | Putative anti-sigma factor. | 0.484 |
AMIS_69230 | AMIS_74410 | Hypothetical protein; PspA/IM30 family. | Putative membrane protein. | 0.506 |
AMIS_73010 | AMIS_11030 | Putative anti-sigma factor. | Hypothetical protein. | 0.549 |
AMIS_73010 | AMIS_69230 | Putative anti-sigma factor. | Hypothetical protein; PspA/IM30 family. | 0.484 |
AMIS_73010 | AMIS_74410 | Putative anti-sigma factor. | Putative membrane protein. | 0.557 |
AMIS_73010 | AMIS_75430 | Putative anti-sigma factor. | Hypothetical protein. | 0.441 |
AMIS_74410 | AMIS_11030 | Putative membrane protein. | Hypothetical protein. | 0.531 |
AMIS_74410 | AMIS_16620 | Putative membrane protein. | Hypothetical protein; Membrane flanked domain. | 0.562 |
AMIS_74410 | AMIS_6900 | Putative membrane protein. | Hypothetical protein. | 0.445 |
AMIS_74410 | AMIS_69230 | Putative membrane protein. | Hypothetical protein; PspA/IM30 family. | 0.506 |
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