Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_1100 | AMIS_17110 | Hypothetical protein. | Hypothetical protein. | 0.514 |
AMIS_1100 | AMIS_5910 | Hypothetical protein. | Hypothetical protein. | 0.499 |
AMIS_1100 | AMIS_74560 | Hypothetical protein. | Hypothetical protein. | 0.569 |
AMIS_1100 | AMIS_74650 | Hypothetical protein. | Hypothetical protein. | 0.554 |
AMIS_1100 | AMIS_80580 | Hypothetical protein. | Hypothetical protein. | 0.770 |
AMIS_12200 | AMIS_5910 | Hypothetical protein. | Hypothetical protein. | 0.531 |
AMIS_12200 | AMIS_74560 | Hypothetical protein. | Hypothetical protein. | 0.459 |
AMIS_14880 | AMIS_49720 | Putative methyltransferase. | Hypothetical protein; Condensation domain of NRPS. | 0.524 |
AMIS_14880 | AMIS_74560 | Putative methyltransferase. | Hypothetical protein. | 0.459 |
AMIS_17110 | AMIS_1100 | Hypothetical protein. | Hypothetical protein. | 0.514 |
AMIS_17110 | AMIS_74560 | Hypothetical protein. | Hypothetical protein. | 0.487 |
AMIS_17110 | AMIS_80580 | Hypothetical protein. | Hypothetical protein. | 0.483 |
AMIS_4270 | AMIS_5910 | Hypothetical protein. | Hypothetical protein. | 0.603 |
AMIS_4270 | AMIS_74560 | Hypothetical protein. | Hypothetical protein. | 0.468 |
AMIS_4270 | AMIS_74650 | Hypothetical protein. | Hypothetical protein. | 0.405 |
AMIS_4270 | AMIS_80580 | Hypothetical protein. | Hypothetical protein. | 0.421 |
AMIS_49720 | AMIS_14880 | Hypothetical protein; Condensation domain of NRPS. | Putative methyltransferase. | 0.524 |
AMIS_49720 | AMIS_74560 | Hypothetical protein; Condensation domain of NRPS. | Hypothetical protein. | 0.455 |
AMIS_5910 | AMIS_1100 | Hypothetical protein. | Hypothetical protein. | 0.499 |
AMIS_5910 | AMIS_12200 | Hypothetical protein. | Hypothetical protein. | 0.531 |
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