STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AMIS_74930Putative galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (376 aa)    
Predicted Functional Partners:
AMIS_7260
Putative galactose-1-phosphate uridylyltransferase.
 0.999
AMIS_74920
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.996
AMIS_24000
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.988
AMIS_3920
Putative aldose-1-epimerase.
  
 0.980
rpsL
Putative ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
      
 0.716
AMIS_75310
Putative UTP-glucose-1-phosphate uridylyltransferase.
     
 0.711
xylB
Putative xylulokinase; Catalyzes the phosphorylation of D-xylulose to D-xylulose 5- phosphate; Belongs to the FGGY kinase family.
  
  
 0.667
AMIS_74900
Putative 2',5' RNA ligase.
       0.650
AMIS_74940
Hypothetical protein.
       0.648
AMIS_64830
Putative alpha-galactosidase; Glycosyl hydrolase, Melibiase.
 
  
 0.647
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.