STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_75950Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AMIS_75960
Hypothetical protein.
       0.685
AMIS_64210
Hypothetical protein.
  
     0.569
AMIS_71400
Hypothetical protein.
  
     0.567
AMIS_68060
Hypothetical protein.
  
     0.551
iolD
Putative myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
  
  
 0.548
AMIS_1900
Putative cytochrome c biogenesis membrane protein.
 
     0.533
AMIS_77700
Hypothetical protein.
  
     0.528
iolB
Putative myo-inositol catabolism protein IolB.
  
  
 0.507
AMIS_79950
Hypothetical protein; CAAX amino terminal protease family.
 
     0.491
AMIS_1080
Hypothetical protein.
  
     0.444
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.