STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_78110Putative FtsK/SpoIIIE family protein. (1268 aa)    
Predicted Functional Partners:
AMIS_78100
Hypothetical protein.
 
 
 0.936
AMIS_13730
Hypothetical protein.
 
 
 0.867
AMIS_80130
Hypothetical protein.
 
 
 0.835
AMIS_13720
Hypothetical protein.
 
 
 0.834
AMIS_3040
Hypothetical protein; Belongs to the WXG100 family.
   
 
 0.804
AMIS_78120
Putative subtilase-family protease; Belongs to the peptidase S8 family.
  
 
 0.735
AMIS_3050
Hypothetical protein; Belongs to the WXG100 family.
 
 
 
 0.701
ftsQ
Putative cell division protein FtsQ; Essential cell division protein.
  
 
 0.574
AMIS_13710
Putative subtilase-family protease.
 
 
 0.523
AMIS_3030
Hypothetical protein.
  
 
 
 0.519
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.