Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_10940 | AMIS_11320 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | 0.768 |
AMIS_10940 | AMIS_1200 | Hypothetical protein. | Hypothetical protein. | 0.765 |
AMIS_10940 | AMIS_5390 | Hypothetical protein. | Hypothetical protein. | 0.763 |
AMIS_10940 | AMIS_64020 | Hypothetical protein. | Hypothetical protein. | 0.751 |
AMIS_10940 | AMIS_72990 | Hypothetical protein. | Hypothetical protein. | 0.601 |
AMIS_10940 | AMIS_74730 | Hypothetical protein. | Hypothetical protein. | 0.767 |
AMIS_10940 | AMIS_77490 | Hypothetical protein. | Hypothetical protein; TPR domain. | 0.702 |
AMIS_10940 | AMIS_800 | Hypothetical protein. | Hypothetical protein. | 0.586 |
AMIS_10940 | AMIS_80430 | Hypothetical protein. | Hypothetical protein. | 0.738 |
AMIS_10940 | AMIS_8140 | Hypothetical protein. | Hypothetical protein. | 0.731 |
AMIS_11320 | AMIS_10940 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.768 |
AMIS_11320 | AMIS_1200 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.770 |
AMIS_11320 | AMIS_5390 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.773 |
AMIS_11320 | AMIS_64020 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.755 |
AMIS_11320 | AMIS_72990 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.685 |
AMIS_11320 | AMIS_74730 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.772 |
AMIS_11320 | AMIS_77490 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein; TPR domain. | 0.760 |
AMIS_11320 | AMIS_800 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.712 |
AMIS_11320 | AMIS_80430 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.735 |
AMIS_11320 | AMIS_8140 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily. | Hypothetical protein. | 0.682 |
page 1 of 6