STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI97843.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
ALJ01110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.976
ALI97832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.660
ALJ01104.1
Biopolymer transporter Tol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.658
ALJ01105.1
PKD domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.607
ALJ01111.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.587
ALJ01197.1
Neuraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
ALJ01108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.415
Your Current Organism:
Rufibacter tibetensis
NCBI taxonomy Id: 512763
Other names: CCTCC AB 208084, NRRL B-51285, R. tibetensis, Rufibacter tibetensis Abaydulla et al. 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.