Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI98067.1 | ALJ00363.1 | DC20_02605 | DC20_17030 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.655 |
ALI98067.1 | ALJ00889.1 | DC20_02605 | DC20_20230 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
ALI99687.1 | ALJ00363.1 | DC20_12780 | DC20_17030 | Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.695 |
ALJ00116.1 | ALJ00363.1 | DC20_15490 | DC20_17030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
ALJ00363.1 | ALI98067.1 | DC20_17030 | DC20_02605 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.655 |
ALJ00363.1 | ALI99687.1 | DC20_17030 | DC20_12780 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.695 |
ALJ00363.1 | ALJ00116.1 | DC20_17030 | DC20_15490 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
ALJ00363.1 | ALJ00889.1 | DC20_17030 | DC20_20230 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
ALJ00363.1 | pyrE | DC20_17030 | DC20_17035 | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.498 |
ALJ00889.1 | ALI98067.1 | DC20_20230 | DC20_02605 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.771 |
ALJ00889.1 | ALJ00363.1 | DC20_20230 | DC20_17030 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
pyrE | ALJ00363.1 | DC20_17035 | DC20_17030 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |