STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13a1Coagulation factor XIII, A1 subunit. (732 aa)    
Predicted Functional Partners:
F13b
Coagulation factor XIII, beta subunit.
    
 0.949
F2
Coagulation factor II.
     
 0.873
Zfp408
Zinc finger protein 408.
    
  0.771
Fga
Fibrinogen alpha chain.
    
 0.703
Fgg
Fibrinogen gamma chain.
    
 0.645
Serpine2
Serine (or cysteine) peptidase inhibitor, clade E, member 2.
     
 0.623
Serpind1
Serine (or cysteine) peptidase inhibitor, clade D, member 1.
     
 0.606
Serpinc1
Serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1.
     
 0.604
Fgb
Fibrinogen beta chain.
    
 0.599
F10
Coagulation factor X.
     
 0.593
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.