STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chd2Chromodomain helicase DNA binding protein 2. (1827 aa)    
Predicted Functional Partners:
Arid4a
AT rich interactive domain 4A (RBP1-like).
   
 0.762
Arid4b
AT rich interactive domain 4B (RBP1-like).
   
 0.759
Supt16
SPT16, facilitates chromatin remodeling subunit.
    
 
 0.750
Ruvbl1
RuvB-like protein 1.
    
 0.742
Polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.731
Supt5
Suppressor of Ty 5, DSIF elongation factor subunit.
   
 
 0.729
Ddx6
DEAD (Asp-Glu-Ala-Asp) box polypeptide 6.
  
 0.727
Polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.723
Actr5
ARP5 actin-related protein 5.
    
 0.722
Leo1
Leo1, Paf1/RNA polymerase II complex component.
   
 
 0.712
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.