STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Car8Carbonic anhydrase 8. (290 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.770
Itpr1
Inositol 1,4,5-trisphosphate receptor 1.
   
 
 0.763
Gtpbp4
GTP binding protein 4.
   
  
 0.597
Pwp2
PWP2 periodic tryptophan protein homolog (yeast).
   
    0.594
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
    0.594
ENSJJAP00000024159
annotation not available
   
    0.594
Rrp12
Ribosomal RNA processing 12 homolog (S. cerevisiae).
   
    0.593
ENSJJAP00000002343
annotation not available
   
    0.591
Pum3
Pumilio RNA-binding family member 3.
   
    0.591
ENSJJAP00000005728
annotation not available
   
    0.584
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.