STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tspan2Tetraspanin 2. (221 aa)    
Predicted Functional Partners:
ENSJJAP00000003817
annotation not available
    
  0.743
Met
Met proto-oncogene.
    
  0.743
Cd63
CD63 antigen.
    
 
0.656
Cd19
CD19 antigen.
    
 0.589
Tspan7
Tetraspanin 7.
   
  
0.578
Vipr1
Vasoactive intestinal peptide receptor 1.
      
 0.570
Ptgs1
Prostaglandin-endoperoxide synthase 1.
      
 0.570
ENSJJAP00000009015
annotation not available
    
 0.554
Gdf15
Growth differentiation factor 15.
    
 0.529
Ptgfrn
Prostaglandin F2 receptor negative regulator.
    
 
 0.521
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.