STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsrp1Arginine/serine rich protein 1. (285 aa)    
Predicted Functional Partners:
Clk2
CDC-like kinase 2.
   
 
 0.791
Srsf5
Serine/arginine-rich splicing factor 5.
   
    0.779
Clk3
CDC-like kinase 3.
   
   0.779
Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae).
 
    
 0.631
Clk1
CDC-like kinase 1.
   
   0.626
Tmem50a
Transmembrane protein 50A.
      
 0.546
Maco1
Macoilin 1.
      
 0.537
Clk4
CDC like kinase 4.
   
   0.499
Ccdc180
Coiled-coil domain containing 180.
      
 0.456
Tmem50b
Transmembrane protein 50B.
      
 0.456
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.