STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sox18SRY (sex determining region Y)-box 18. (377 aa)    
Predicted Functional Partners:
Cldn5
Claudin 5.
   
  
 0.921
Lef1
Lymphoid enhancer binding factor 1.
    
0.862
Tcf7
Transcription factor 7, T cell specific.
    
0.845
Robo4
Roundabout guidance receptor 4.
   
  
 0.827
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.782
Rasip1
Ras interacting protein 1.
   
  
 0.776
Kdr
Kinase insert domain protein receptor.
   
  
 0.774
Pou5f1
POU domain, class 5, transcription factor 1.
    
 0.774
ENSJJAP00000019929
annotation not available
    
0.770
Tcf7l1
Transcription factor 7 like 1 (T cell specific, HMG box).
    
0.770
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.