STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sbf1SET binding factor 1. (1894 aa)    
Predicted Functional Partners:
Mtmr2
Myotubularin related protein 2.
   
0.958
Mtmr1
Myotubularin related protein 1.
   
0.817
Mtm1
X-linked myotubular myopathy gene 1.
   
0.742
Rab21
RAB21, member RAS oncogene family.
    
 0.741
ENSJJAP00000000681
annotation not available
    
 0.679
ENSJJAP00000001161
annotation not available
    
 0.679
ENSJJAP00000015723
annotation not available
    
0.679
ENSJJAP00000017807
annotation not available
    
 
 0.674
Fig4
FIG4 phosphoinositide 5-phosphatase.
     
 0.673
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.585
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.